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Next-Generation Proteomics Reveals a Greater Antioxidative Response to Drought in Coffea arabica Than in Coffea canephora

2022-01-08Artigo científico Acesso aberto
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dc.contributor.authorMarques, Isabel
dc.contributor.authorGouveia, Duarte
dc.contributor.authorGaillard, Jean Charles
dc.contributor.authorMartins, Sónia
dc.contributor.authorSemedo, Magda C.
dc.contributor.authorLidon, Fernando C.
dc.contributor.authorDaMatta, Fábio M.
dc.contributor.authorRibeiro-Barros, Ana I.
dc.contributor.authorArmengaud, Jean
dc.contributor.authorRamalho, José C.
dc.contributor.institutionGeoBioTec - Geobiociências, Geoengenharias e Geotecnologias
dc.contributor.pblMDPI - Multidisciplinary Digital Publishing Institute
dc.date.accessioned2023-03-21T22:28:33Z
dc.date.available2023-03-21T22:28:33Z
dc.date.issued2022-01-08
dc.descriptionFunding Information: Fellowships from the Conselho Nacional de Desenvolvimento Científico e Tecnológico, Brazil (CNPq), and the Fundação de Amparo à Pesquisa do Estado de Minas Gerais, Brazil (FAPEMIG, project CRA-RED-00053-16), to F.M. DaMatta are also greatly acknowledged. Publisher Copyright: © 2022 by the authors. Licensee MDPI, Basel, Switzerland.
dc.description.abstractDrought is a major threat to coffee, compromising the quality and quantity of its production. We have analyzed the core proteome of 18 Coffea canephora cv. Conilon Clone 153 and C. arabica cv. Icatu plants and assessed their responses to moderate (MWD) and severe (SWD) water deficits. Label-free quantitative shotgun proteomics identified 3000 proteins in both genotypes, but less than 0.8% contributed to ca. 20% of proteome biomass. Proteomic changes were dependent on the severity of drought, being stronger under SWD and with an enrolment of different proteins, functions, and pathways than under MWD. The two genotypes displayed stress-responsive proteins under SWD, but only C. arabica showed a higher abundance of proteins involved in antioxidant detoxification activities. Overall, the impact of MWD was minor in the two genotypes, contrary to previous studies. In contrast, an extensive proteomic response was found under SWD, with C. arabica having a greater potential for acclimation/resilience than C. canephora. This is likely supported by a wider antioxidative response and an ability to repair photosynthetic structures, being crucial to develop new elite genotypes that assure coffee supply under water scarcity levels.en
dc.description.versionpublishersversion
dc.description.versionpublished
dc.format.extent20
dc.format.extent2417875
dc.identifier.doi10.3390/agronomy12010148
dc.identifier.issn2073-4395
dc.identifier.otherPURE: 56523623
dc.identifier.otherPURE UUID: d115ddb4-4614-4f26-ae63-bb5208c9d744
dc.identifier.otherScopus: 85123702819
dc.identifier.otherWOS: 000749817300001
dc.identifier.urihttp://hdl.handle.net/10362/151029
dc.identifier.urlhttps://www.scopus.com/pages/publications/85123702819
dc.language.isoeng
dc.peerreviewedyes
dc.relationinfo:eu-repo/grantAgreement/EC/H2020/727934/EU
dc.relationBREEDing Coffee for AgroForestry Systems
dc.relationA systems approach to understand the impact of climate changes in Coffea spp.
dc.relationForest Research Centre
dc.relationGeoBioSciences GeoTechnologies and GeoEngineering
dc.relationinfo:eu-repo/grantAgreement/FCT/6817 - DCRRNI ID/UIDP%2F04035%2F2020/PT
dc.subjectAcclimation
dc.subjectClimate change
dc.subjectCoffee
dc.subjectComparative proteome
dc.subjectWater deficit response
dc.subjectAgronomy and Crop Science
dc.subjectSDG 6 - Clean Water and Sanitation
dc.subjectSDG 13 - Climate Action
dc.titleNext-Generation Proteomics Reveals a Greater Antioxidative Response to Drought in Coffea arabica Than in Coffea canephoraen
dc.typejournal article
degois.publication.issue1
degois.publication.titleAgronomy
degois.publication.volume12
dspace.entity.typePublication
oaire.awardNumber727934
oaire.awardNumberPTDC/ASP-AGR/31257/2017
oaire.awardNumberUIDB/00239/2020
oaire.awardNumberUIDP/04035/2020
oaire.awardTitleBREEDing Coffee for AgroForestry Systems
oaire.awardTitleA systems approach to understand the impact of climate changes in Coffea spp.
oaire.awardTitleForest Research Centre
oaire.awardTitleGeoBioSciences GeoTechnologies and GeoEngineering
oaire.awardURIinfo:eu-repo/grantAgreement/EC/H2020/727934/EU
oaire.awardURIinfo:eu-repo/grantAgreement/FCT/3599-PPCDT/PTDC%2FASP-AGR%2F31257%2F2017/PT
oaire.awardURIinfo:eu-repo/grantAgreement/FCT/6817 - DCRRNI ID/UIDB%2F00239%2F2020/PT
oaire.awardURIinfo:eu-repo/grantAgreement/FCT/6817 - DCRRNI ID/UIDP%2F04035%2F2020/PT
oaire.fundingStreamH2020
oaire.fundingStream3599-PPCDT
oaire.fundingStream6817 - DCRRNI ID
oaire.fundingStream6817 - DCRRNI ID
project.funder.identifierhttp://doi.org/10.13039/501100008530
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.nameEuropean Commission
project.funder.nameFundação para a Ciência e a Tecnologia
project.funder.nameFundação para a Ciência e a Tecnologia
project.funder.nameFundação para a Ciência e a Tecnologia
rcaap.rightsopenAccess
relation.isProjectOfPublicationaae4c709-114a-4a56-849d-8c14f62ae994
relation.isProjectOfPublication1ffa41bc-8c2c-4a18-8505-1d6bef44e760
relation.isProjectOfPublication3e4e8c15-b7bc-4b0f-b32a-764022bf66d2
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relation.isProjectOfPublication.latestForDiscoveryaae4c709-114a-4a56-849d-8c14f62ae994

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