| Issue Date | Title | Author(s) | Type | Access Type |
| 8-May-2019 | A computational method for the identification of dengue, zika and chikungunya virus species and genotypes | Fonseca, Vagner S.; Libin, Pieter J. K.; Theys, Kristof; Faria, Nuno Rodrigues; Nunes, Márcio Roberto Texeira; Restovic, Maria I.; Freire, Murilo; Giovanetti, Marta; Cuypers, Lize; Nowé, Ann; Abecasis, AB; Deforche, Koen; Santiago, Gilberto A.; de Siqueira, Isadora Cristina; San, Emmanuel J.; Machado, Kaliane C.B.; Azevedo, Vasco Ariston De Carvalho; de Filippis, Ana Maria Bispo; da Cunha, Rivaldo Venâncio; Pybus, Oliver George; Vandamme, AM; Alcantara, L. C. J.; de Oliveira, Túlio | article |  |
| 7-Jan-2015 | A new ensemble coevolution system for detecting HIV-1 protein coevolution | Li, Guangdi; Theys, Kristof; Verheyen, Jens; Pineda-Peña, Andrea Clemencia; Khouri, Ricardo; Piampongsant, Supinya; Eusébio, Mónica; Ramon, Jan; Vandamme, Anne Mieke | article | |
| 15-Feb-2015 | An integrated map of HIV genome-wide variation from a population perspective | Li, Guangdi; Piampongsant, Supinya; Faria, Rodrigues N.; Voet, Arnout; Pineda-Peña, Andrea Clemencia; Khouri, Ricardo; Lemey, Philippe; Vandamme, Anne Mieke; Theys, Kristof | article | |
| Jun-2023 | Analyses of Early ZIKV Genomes Are Consistent with Viral Spread from Northeast Brazil to the Americas | de Moraes, Laise; Portilho, Moyra M.; Vrancken, Bram; Van den Broeck, Frederik; Santos, Luciane Amorim; Cucco, Marina; Tauro, Laura B.; Kikuti, Mariana; Silva, Monaise M.O.; Campos, Gúbio S.; Reis, Mitermayer G.; Barral, Aldina; Barral-Netto, Manoel; Boaventura, Viviane Sampaio; Vandamme, Anne Mieke; Theys, Kristof; Lemey, Philippe; Ribeiro, Guilherme S.; Khouri, Ricardo | article | |
| 2015 | CRF19_cpx is an evolutionary fit HIV-1 variant exclusively associated with rapid progression to AIDS in Cuba. | Kourí, Vivian; Khouri, Ricardo; Alemán, Yoan; Vercauteren, Jurgen; Pineda-Peña, AC; Theys, Kristof; Megens, S.; Moutschen, M.; Pfeifer, Nico; Weyenbergh, Johan V.; Pérez, Ana B; Pérez, J; Pérez , L; Van Laethem, K; Vandamme, AM | article | |
| 30-Sep-2019 | Drivers of HIV-1 transmission | Pineda-Peña, AC; Pingarilho, Marta; Li, Guangdi; Vrancken, Bram; Libin, Pieter; Gomes, Perpétua; Camacho, Ricardo Jorge; Theys, Kristof; Abecasis, AB; Portuguese HIV-1 Resistance Study Group | article | |
| 1-Oct-2017 | Epidemic dispersion of HIV and HCV in a population of co-infected Romanian injecting drug users | Paraschiv, Simona; Banica, Leontina; Nicolae, Ionelia; Niculescu, Iulia; Abagiu, Adrian; Jipa, Raluca; Pineda-Peña, Andrea Clemencia; Pingarilho, Marta; Neaga, Emil; Theys, Kristof; Libin, Pieter; Otelea, Dan; Abecasis, Ana | article | |
| 20-Feb-2016 | Erratum | Winand, Raf; Theys, Kristof; Eusébio, Mónica; Aerts, Jan; Camacho, Ricardo J.; Gomes, Perpetua; Suchard, Marc A.; Vandamme, Anne Mieke; Abecasis, Ana B. | other | |
| 29-Mar-2022 | Genome-Wide Diversity of Zika Virus | Seabra, Sofia G; Libin, Pieter J. K.; Theys, Kristof; Zhukova, Anna; Potter, Barney I; Nebenzahl-guimaraes, Hanna; Gorbalenya, Alexander E; Sidorov, Igor A.; Pimentel, Victor; Pingarilho, Marta; De Vasconcelos, Ana T. R.; Dellicour, Simon; Khouri, Ricardo; Gascuel, Olivier; Vandamme, Anne-mieke; Baele, Guy; Cuypers, Lize; Abecasis, Ana B | article | |
| 23-Jan-2008 | HIV-1 gp120 N-linked glycosylation differs between plasma and leukocyte compartments | Ho, Yung Shwen; Abecasis, Ana B; Theys, Kristof; Deforche, Koen; Dwyer, Dominic E; Charleston, Michael; Vandamme, Anne Mieke; Saksena, Nitin K | article | |
| 1-Dec-2018 | HIV-1 Infection in Cyprus, the Eastern Mediterranean European Frontier | Pineda-Peña, Andrea Clemencia; Theys, Kristof; Stylianou, Dora C.; Demetriades, Ioannis; Puchhammer, Elisabeth; Vandamme, Anne Mieke; Aleksiev, Ivailo; Lepej, Snjezana Zidovec; Linka, Marek; Fonager, Jannik; Liitsola, Kirsi; Kaiser, Rolf; Hamouda, Osamah; Paraskevis, Dimitrios; Coughlan, Suzie; Grossman, Zehava; Mor, Orna; Zazzi, Maurizio; Griskevicius, Algirdas; Lipnickiene, Vilnele; Devaux, Carole; Boucher, Charles; Hofstra, Marije; Wensing, Annemarie; Bakken-Kran, Anne Marte; Horban, Andrzej; Camacho, Ricardo; Paraschiv, Simona; Otelea, Dan; Stanojevic, Maja; Stanekova, Danika; Poljak, Mario; Garcia, Federico; Paredes, Roger; Albert, Jan; Abecasis, Ana B.; Kostrikis, Leondios G. | article | |
| 30-Oct-2020 | Increasing prevalence of HIV-1 transmitted drug resistance in Portugal | Pingarilho, Marta; Pimentel, Victor; Diogo, Isabel; Fernandes, Sandra; Miranda, Mafalda; Pineda-Peña, AC; Libin, Pieter; Theys, Kristof; Martins, MR; Vandamme, AM; Camacho, Ricardo J.; Gomes, Perpétua; Abecasis, AB | article | |
| 15-Dec-2017 | PhyloGeoTool | Libin, Pieter; Vanden Eynden, Ewout; Incardona, Francesca; Nowé, Ann; Bezenchek, Antonia; Sönnerborg, Anders; Vandamme, Anne-Mieke; Theys, Kristof; Baele, Guy; EucoHIV study group | article | |
| 18-Oct-2018 | Time to harmonize dengue nomenclature and classification | Cuypers, Lize; Pieter J.K., Libin,; Peter, Simmonds,; Nowé, Ann; Jorge Luis, Muñoz-Jordán,; Luiz Carlos, Júnior Alcântara,; Vandamme, AM; Gilberto A., Santiago,; Theys, Kristof | article | |
| May-2019 | VIRULIGN | Libin, Pieter J.K.; Deforche,, K.; Abecasis, AB; Theys, Kristof | article | |
| 1-Sep-2017 | Zika genomics urgently need standardized and curated reference sequences | Theys, Kristof; Libin, Pieter; Dallmeier, Kai; Pineda-Peña, Andrea Clemencia; Vandamme, Anne Mieke; Cuypers, Lize; Abecasis, Ana B. | other | |
