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| Issue Date | Title | Author(s) | Type | Access Type |
| 1-Sep-2014 | A robust SNP barcode for typing Mycobacterium tuberculosis complex strains | Coll, Francesc; McNerney, Ruth; Guerra-Assunção, José Afonso; Glynn, Judith R.; Perdigão, João; Viveiros, Miguel; Portugal, Isabel; Pain, Arnab; Martin, Nigel; Clark, Taane G. | article |  |
| 2-Nov-2020 | Author Correction | Verza, Mirela; Scheffer, Mara Cristina; Salvato, Richard Steiner; Schorner, Marcos André; Barazzetti, Fernando Hartmann; de Melo Machado, Hanalydia; Medeiros, Taiane Freitas; Rovaris, Darcita Buerger; Portugal, Isabel; Viveiros, Miguel; Perdigão, João; Kritski, Afrânio; Bazzo, Maria Luiza | other | |
| 6-Apr-2012 | Contribution of Efflux to the Emergence of Isoniazid and Multidrug Resistance in Mycobacterium tuberculosis. | Machado, D; Couto, Isabel Maria dos Santos Leitão; Perdigão, João; Rodrigues, Liliana; Portugal, Isabel; Baptista, Pedro; Veigas, Bruno; Amaral, Leonard; Bettencourt, Miguel Viveiros | article | |
| 2019 | CPLP-TB: | Perdigão, João; Silva, Carla; Diniz, Jaciara; Pereira, Catarina; Machado, Diana; Ramos, Jorge; Silva, Hugo; Abilleira , Fernanda; Brum, Clarice; Reis, Ana J; Macedo, Maíra; Scaini, João L; Silva , Ana B.; Esteves, Leonardo S.; Macedo, Rita; Maltez, Fernando; Clemente, Sofia; Coelho, Elizabeth; Viegas, Sofia; Rabna, Paulo; Rodrigues, Amabélia; Taveira, Nuno; Jordão, Luísa; Kritski, Afrânio; Lapa E Silva, José Roberto; Mokrousov, Igor; Couvin, David; Rastogi, Nalin; Couto, I; Pain, Arnab; McNerney, Ruth; Clark, Taane G.; Groll, Andrea von; Dalla Costa, Elis R.; Rossetti, Maria Lúcia; da Silva, Pedro E Almeida; Viveiros, M; Portugal, Isabel | article | |
| 1-May-2015 | Direct detection by the xpert MTB/RIF assay and characterization of multi and poly drug- resistant tuberculosis in Guinea-Bissau, West Africa | Rabna, Paulo; Ramos, Jorge; Ponce, Gema; Sanca, Lilica; Mané, Morto; Armada, Ana; Machado, Diana; Vieira, Fina; Gomes, Victor F.; Martins, Elisabete; Colombatti, Raffaella; Riccardi, Fabio; Perdigão, João; Sotero, Joana; Portugal, Isabel; Couto, Isabel; Atouguia, Jorge; Rodrigues, Amabélia; Viveiros, Miguel | article | |
| Mar-2018 | Efflux Activity Differentially Modulates the Levels of Isoniazid and Rifampicin Resistance among Multidrug Resistant and Monoresistant Mycobacterium tuberculosis Strains | Machado, Diana; Perdigao, Joao; Portugal, Isabel; Pieroni, Marco; Silva, Pedro A.; Couto, Isabel; Viveiros, Miguel | article | |
| 30-Sep-2021 | Genetic diversity of candidate loci linked to Mycobacterium tuberculosis resistance to bedaquiline, delamanid and pretomanid | Gómez-González, Paula J.; Perdigao, Joao; Gomes, Pedro; Puyen, Zully M.; Santos-Lazaro, David; Napier, Gary; Hibberd, Martin L.; Viveiros, Miguel; Portugal, Isabel; Campino, Susana; Phelan, Jody E.; Clark, Taane G. | article | |
| 23-Feb-2017 | Genetic diversity, transmission dynamics and drug resistance of Mycobacterium tuberculosis in Angola | Perdigão, João; Clemente, Sofia; Ramos, Jorge; Masakidi, Pedro; Machado, Diana; Silva, Carla; Couto, Isabel; Viveiros, Miguel; Taveira, Nuno; Portugal, Isabel | article | |
| 29-Mar-2019 | Genome-wide analysis of Mycobacterium tuberculosis polymorphisms reveals lineage-specific associations with drug resistance | Oppong, Yaa E. A.; Phelan, Jody; Perdigao, Joao; Machado, Diana; Miranda, Anabela; Portugal, Isabel; Viveiros, Miguel; Clark, Taane G.; Hibberd, Martin L. | article | |
| 30-Jul-2020 | Genomic epidemiology of Mycobacterium tuberculosis in Santa Catarina, Southern Brazil | Verza, Mirela; Scheffer, Mara Cristina; Salvato, Richard Steiner; Schorner, Marcos André; Barazzetti, Fernando Hartmann; Machado, Hanalydia de Melo; Medeiros, Taiane Freitas; Rovaris, Darcita Buerger; Portugal, Isabel; Viveiros, Miguel; Perdigão, João; Kritski, Afrânio; Bazzo, Maria Luiza | article | |
| Oct-2021 | Genomic-based surveillance reveals high ongoing transmission of multi-drug-resistant Mycobacterium tuberculosis in Southern Brazil | Salvato, Richard Steiner; Reis, Ana Júlia; Schiefelbein, Sun Hee; Gómez, Michael Andrés Abril; Salvato, Stéphanie Steiner; da Silva, Larissa Vitória; Costa, Elis Regina Dalla; Unis, Gisela; Dias, Claudia Fontoura; Viveiros, Miguel; Portugal, Isabel; von Groll, Andrea; da Silva, Pedro Eduardo Almeida; Kritski, Afrânio Lineu; Perdigão, João; Rossetti, Maria Lucia Rosa | article | |
| 17-Oct-2018 | Global expansion of Mycobacterium tuberculosis lineage 4 shaped by colonial migration and local adaptation | Brynildsrud, Ola B.; Pepperell, Caitlin S.; Suffys, Philip; Grandjean, Louis; Monteserin, Johana; Debech, Nadia; Bohlin, Jon; Alfsnes, Kristian; Pettersson, John O.H.; Kirkeleite, Ingerid; Fandinho, Fatima; da Silva, Marcia Aparecida; Perdigao, Joao; Portugal, Isabel; Viveiros, Miguel; Clark, Taane; Caws, Maxine; Dunstan, Sarah; Thai, Phan Vuong Khac; Lopez, Beatriz; Ritacco, Viviana; Kitchen, Andrew; Brown, Tyler S.; van Soolingen, Dick; O'Neill, Mary B.; Holt, Kathryn E.; Feil, Edward J.; Mathema, Barun; Balloux, Francois; Eldholm, Vegard | article | |
| 27-Apr-2017 | Interplay between mutations and efflux in drug resistant clinical isolates of mycobacterium tuberculosis | Machado, Diana; Coelho, Tatiane S; Perdigão, João; Pereira, Catarina; Couto, Isabel; Portugal, Isabel; Maschmann, Raquel De Abreu; Ramos, Daniela F; von Groll, Andrea; Rossetti, Maria L R; Silva, Pedro A; Viveiros, Miguel | article | |
| 26-Feb-2016 | Ion channel blockers as antimicrobial agents, efflux inhibitors, and enhancers of macrophage killing activity against drug resistant mycobacterium tuberculosis | Machado, Diana; Pires, David; Perdigão, João; Couto, Isabel; Portugal, Isabel; Martins, Marta; Amaral, Leonard; Anes, Elsa; Viveiros, Miguel | article | |
| 1-Dec-2018 | Methylation in Mycobacterium tuberculosis is lineage specific with associated mutations present globally | Phelan, Jody; De Sessions, Paola Florez; Tientcheu, Leopold; Perdigao, Joao; Machado, Diana; Hasan, Rumina; Hasan, Zahra; Bergval, Indra L.; Anthony, Richard; McNerney, Ruth; Antonio, Martin; Portugal, Isabel; Viveiros, Miguel; Campino, Susana; Hibberd, Martin L.; Clark, Taane G. | article | |
| 1-Dec-2015 | Multidrug-resistant mycobacterium tuberculosis of the Latin American mediterranean lineage, wrongly identified as mycobacterium pinnipedii (Spoligotype International Type 863 [SIT863]), causing active tuberculosis in South Brazil | Dalla Costa, Elis R.; Vasconcelos, Sidra E G; Esteves, Leonardo S.; Gomes, Harrison M.; Gomes, Lia L.; Da Silva, Pedro Almeida; Perdigão, João; Portugal, Isabel; Viveiros, Miguel; McNerney, Ruth; Pain, Arnab; Clark, Taane G.; Rastogi, Nalin; Unis, Gisela; Rossetti, Maria Lucia R; Suffys, Philip Noel | article | |
| 27-May-2015 | Rapid determination of anti-tuberculosis drug resistance from whole-genome sequences | Coll, Francesc; McNerney, Ruth; Preston, Mark D.; Guerra-Assunção, José Afonso; Warry, Andrew; Hill-Cawthorne, Grant; Mallard, Kim; Nair, Mridul; Miranda, Anabela; Alves, Adriana; Perdigão, João; Viveiros, Miguel; Portugal, Isabel; Hasan, Zahra; Hasan, Rumina; Glynn, Judith R.; Martin, Nigel; Pain, Arnab; Clark, Taane G. | article | |
| 2015 | Rapid determination of antituberculosis drug resistance from wholegenome sequences. | Coll, Francesc; McNerney, Ruth; Preston, Mark D.; Guerra-Assunção, José Afonso; Warry, Andrew; Hill-Cawthorne, Grant; Mallard, Kim; Nair, Mridul; Miranda, Anabela; Alves, Adriana; Perdigão, João; Viveiros, M; Portugal, Isabel; Hasan, Zahra; Hasan, Rumina; Glynn, Judith R.; Martin, Nigel; Pain, Arnab; Clark, Taane G. | article | |
| 29-Feb-2016 | Recombination in pe/ppe genes contributes to genetic variation in Mycobacterium tuberculosis lineages | Phelan, Jody E.; Coll, Francesc; Bergval, Indra; Anthony, Richard M.; Warren, Rob; Sampson, Samantha L.; Gey van Pittius, Nicolaas C.; Glynn, Judith R.; Crampin, Amelia C.; Alves, Adriana; Bessa, Theolis Barbosa; Campino, Susana; Dheda, Keertan; Grandjean, Louis; Hasan, Rumina; Hasan, Zahra; Miranda, Anabela; Moore, David; Panaiotov, Stefan; Perdigao, Joao; Portugal, Isabel; Sheen, Patricia; de Oliveira Sousa, Erivelton; Streicher, Elizabeth M.; van Helden, Paul D.; Viveiros, Miguel; Hibberd, Martin L.; Pain, Arnab; McNerney, Ruth; Clark, Taane G. | article | |
| Dec-2017 | Role of alanine racemase mutations in Mycobacterium tuberculosis D-cycloserine resistance | Nakatani, Yoshio; Opel-Reading, Helen K; Merker, Matthias; Machado, Diana; Andres, Sönke; Kumar, S Siva; Moradigaravand, Danesh; Coll, Francesc; Perdigão, João; Portugal, Isabel; Schön, Thomas; Nair, Dina; Devi, K R Uma; Kohl, Thomas A; Beckert, Patrick; Clark, Taane G; Maphalala, Gugu; Khumalo, Derrick; Diel, Roland; Klaos, Kadri; Aung, Htin Lin; Cook, Gregory M; Parkhill, Julian; Peacock, Sharon J; Swaminathan, Soumya; Viveiros, Miguel; Niemann, Stefan; Krause, Kurt L; Köser, Claudio U | article | |
